{"id":322835,"date":"2016-11-16T10:01:07","date_gmt":"2016-11-16T18:01:07","guid":{"rendered":"https:\/\/www.microsoft.com\/en-us\/research\/?post_type=msr-research-item&#038;p=322835"},"modified":"2018-10-16T20:17:12","modified_gmt":"2018-10-17T03:17:12","slug":"hexanucleotide-repeat-expansion-c9orf72-cause-chromosome-9p21-linked-als-ftd","status":"publish","type":"msr-research-item","link":"https:\/\/www.microsoft.com\/en-us\/research\/publication\/hexanucleotide-repeat-expansion-c9orf72-cause-chromosome-9p21-linked-als-ftd\/","title":{"rendered":"A Hexanucleotide Repeat Expansion in C9ORF72 Is the Cause of Chromosome 9p21-Linked ALS-FTD"},"content":{"rendered":"<p>The chromosome 9p21 amyotrophic lateral sclerosis-frontotemporal dementia (ALS-FTD) locus contains one of the last major unidentified autosomal-dominant genes underlying these common neurodegenerative diseases. We have previously shown that a founder haplotype, covering the MOBKL2b, IFNK, and C9ORF72 genes, is present in the majority of cases linked to this region. Here we show that there is a large hexanucleotide (GGGGCC) repeat expansion in the first intron of C9ORF72 on the affected haplotype. This repeat expansion segregates perfectly with disease in the Finnish population, underlying 46.0% of familial ALS and 21.1% of sporadic ALS in that population. Taken together with the D90A SOD1 mutation, 87% of familial ALS in Finland is now explained by a simple monogenic cause. The repeat expansion is also present in one-third of familial ALS cases of outbred European descent, making it the most common genetic cause of these fatal neurodegenerative diseases identified to date.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The chromosome 9p21 amyotrophic lateral sclerosis-frontotemporal dementia (ALS-FTD) locus contains one of the last major unidentified autosomal-dominant genes underlying these common neurodegenerative diseases. We have previously shown that a founder haplotype, covering the MOBKL2b, IFNK, and C9ORF72 genes, is present in the majority of cases linked to this region. Here we show that there is [&hellip;]<\/p>\n","protected":false},"featured_media":0,"template":"","meta":{"msr-url-field":"","msr-podcast-episode":"","msrModifiedDate":"","msrModifiedDateEnabled":false,"ep_exclude_from_search":false,"_classifai_error":"","msr-author-ordering":null,"msr_publishername":"","msr_publisher_other":"","msr_booktitle":"","msr_chapter":"","msr_edition":"","msr_editors":"","msr_how_published":"","msr_isbn":"","msr_issue":"2","msr_journal":"Neuron","msr_number":"","msr_organization":"","msr_pages_string":"257-268","msr_page_range_start":"257","msr_page_range_end":"268","msr_series":"","msr_volume":"72","msr_copyright":"","msr_conference_name":"","msr_doi":"10.1016\/j.neuron.2011.09.010","msr_arxiv_id":"","msr_s2_paper_id":"","msr_mag_id":"","msr_pubmed_id":"","msr_other_authors":"","msr_other_contributors":"","msr_speaker":"","msr_award":"","msr_affiliation":"","msr_institution":"","msr_host":"","msr_version":"","msr_duration":"","msr_original_fields_of_study":"","msr_release_tracker_id":"","msr_s2_match_type":"","msr_citation_count_updated":"","msr_published_date":"2011-09-21","msr_highlight_text":"","msr_notes":"","msr_longbiography":"","msr_publicationurl":"http:\/\/www.cell.com\/neuron\/abstract\/S0896-6273(11)00797-5","msr_external_url":"","msr_secondary_video_url":"","msr_conference_url":"","msr_journal_url":"","msr_s2_pdf_url":"","msr_year":0,"msr_citation_count":0,"msr_influential_citations":0,"msr_reference_count":0,"msr_s2_match_confidence":0,"msr_microsoftintellectualproperty":true,"msr_s2_open_access":false,"msr_s2_author_ids":[],"msr_pub_ids":[],"msr_hide_image_in_river":0,"footnotes":""},"msr-research-highlight":[],"research-area":[13553],"msr-publication-type":[193715],"msr-publisher":[],"msr-focus-area":[],"msr-locale":[268875],"msr-post-option":[],"msr-field-of-study":[],"msr-conference":[],"msr-journal":[],"msr-impact-theme":[],"msr-pillar":[],"class_list":["post-322835","msr-research-item","type-msr-research-item","status-publish","hentry","msr-research-area-medical-health-genomics","msr-locale-en_us"],"msr_publishername":"","msr_edition":"","msr_affiliation":"","msr_published_date":"2011-09-21","msr_host":"","msr_duration":"","msr_version":"","msr_speaker":"","msr_other_contributors":"","msr_booktitle":"","msr_pages_string":"257-268","msr_chapter":"","msr_isbn":"","msr_journal":"Neuron","msr_volume":"72","msr_number":"","msr_editors":"","msr_series":"","msr_issue":"2","msr_organization":"","msr_how_published":"","msr_notes":"","msr_highlight_text":"","msr_release_tracker_id":"","msr_original_fields_of_study":"","msr_download_urls":"","msr_external_url":"","msr_secondary_video_url":"","msr_longbiography":"","msr_microsoftintellectualproperty":1,"msr_main_download":"","msr_publicationurl":"http:\/\/www.cell.com\/neuron\/abstract\/S0896-6273(11)00797-5","msr_doi":"10.1016\/j.neuron.2011.09.010","msr_publication_uploader":[{"type":"url","title":"http:\/\/www.cell.com\/neuron\/abstract\/S0896-6273(11)00797-5","viewUrl":false,"id":false,"label_id":0},{"type":"doi","title":"10.1016\/j.neuron.2011.09.010","viewUrl":false,"id":false,"label_id":0}],"msr_related_uploader":"","msr_citation_count":0,"msr_citation_count_updated":"","msr_s2_paper_id":"","msr_influential_citations":0,"msr_reference_count":0,"msr_arxiv_id":"","msr_s2_author_ids":[],"msr_s2_open_access":false,"msr_s2_pdf_url":null,"msr_attachments":[{"id":0,"url":"http:\/\/www.cell.com\/neuron\/abstract\/S0896-6273(11)00797-5"}],"msr-author-ordering":[{"type":"text","value":"Alan E. Renton","user_id":0,"rest_url":false},{"type":"text","value":"Elisa Majounie","user_id":0,"rest_url":false},{"type":"text","value":"Adrian Waite","user_id":0,"rest_url":false},{"type":"text","value":"Javier Simon-Sanchez","user_id":0,"rest_url":false},{"type":"text","value":"Sara Rollinson","user_id":0,"rest_url":false},{"type":"text","value":"J. Raphael Gibbs","user_id":0,"rest_url":false},{"type":"text","value":"Jennifer C Scymick","user_id":0,"rest_url":false},{"type":"text","value":"Hannu Laaksovirta","user_id":0,"rest_url":false},{"type":"text","value":"John. C. van Swieten","user_id":0,"rest_url":false},{"type":"text","value":"Liisa Myllykangas","user_id":0,"rest_url":false},{"type":"text","value":"Hannu Kalimo","user_id":0,"rest_url":false},{"type":"text","value":"Anders Paetau","user_id":0,"rest_url":false},{"type":"text","value":"Yevgeniya Abramzon","user_id":0,"rest_url":false},{"type":"text","value":"Anne M. Remes","user_id":0,"rest_url":false},{"type":"text","value":"Alice Kaganovich","user_id":0,"rest_url":false},{"type":"text","value":"Sonja W. Scholz","user_id":0,"rest_url":false},{"type":"text","value":"Jamie Duckworth","user_id":0,"rest_url":false},{"type":"text","value":"Jinhui Ding","user_id":0,"rest_url":false},{"type":"text","value":"Daniel W. Harmer","user_id":0,"rest_url":false},{"type":"text","value":"Dena G. Hernandez","user_id":0,"rest_url":false},{"type":"text","value":"Janel O. Johnson","user_id":0,"rest_url":false},{"type":"text","value":"Kin Mok","user_id":0,"rest_url":false},{"type":"text","value":"Mina Ryten","user_id":0,"rest_url":false},{"type":"text","value":"Danyah Trabzuni","user_id":0,"rest_url":false},{"type":"text","value":"Rita J. Guerreiro","user_id":0,"rest_url":false},{"type":"text","value":"Richard W. Orrell","user_id":0,"rest_url":false},{"type":"text","value":"James Neal","user_id":0,"rest_url":false},{"type":"text","value":"Alex Murray","user_id":0,"rest_url":false},{"type":"text","value":"Justin Pearson","user_id":0,"rest_url":false},{"type":"text","value":"Iris E. Jansen","user_id":0,"rest_url":false},{"type":"text","value":"David Sondervan","user_id":0,"rest_url":false},{"type":"text","value":"Harro Seelaar","user_id":0,"rest_url":false},{"type":"text","value":"Derek Blake","user_id":0,"rest_url":false},{"type":"text","value":"Kate Young","user_id":0,"rest_url":false},{"type":"text","value":"Nicola Halliwell","user_id":0,"rest_url":false},{"type":"text","value":"Janis Bennion Callister","user_id":0,"rest_url":false},{"type":"text","value":"Greg Toulson","user_id":0,"rest_url":false},{"type":"text","value":"Anna Richardson","user_id":0,"rest_url":false},{"type":"text","value":"Alex Gerhard","user_id":0,"rest_url":false},{"type":"text","value":"Julie Snowden","user_id":0,"rest_url":false},{"type":"text","value":"David Mann","user_id":0,"rest_url":false},{"type":"text","value":"David Neary","user_id":0,"rest_url":false},{"type":"text","value":"Michael A. Nalls","user_id":0,"rest_url":false},{"type":"text","value":"Terhi Peuralinna","user_id":0,"rest_url":false},{"type":"text","value":"Lilja Jansson","user_id":0,"rest_url":false},{"type":"text","value":"Veli-Matti Isovaiita","user_id":0,"rest_url":false},{"type":"text","value":"Anna-Lotta Kaivorinne","user_id":0,"rest_url":false},{"type":"text","value":"Maarit Holtta-Vuori","user_id":0,"rest_url":false},{"type":"text","value":"Elina Ikonen","user_id":0,"rest_url":false},{"type":"text","value":"Raimo Sulkava","user_id":0,"rest_url":false},{"type":"text","value":"MIchael Benatar","user_id":0,"rest_url":false},{"type":"text","value":"Joanne Wuu","user_id":0,"rest_url":false},{"type":"text","value":"Adriano Chio","user_id":0,"rest_url":false},{"type":"text","value":"Garbiella Restagno","user_id":0,"rest_url":false},{"type":"text","value":"Giuseppe Borghero","user_id":0,"rest_url":false},{"type":"text","value":"Mario Sabatelli","user_id":0,"rest_url":false},{"type":"text","value":"The ITALSGEN Consortium","user_id":0,"rest_url":false},{"type":"user_nicename","value":"heckerma","user_id":31991,"rest_url":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/microsoft-research\/v1\/researchers?person=heckerma"},{"type":"text","value":"Ekaterina ROgaeva","user_id":0,"rest_url":false},{"type":"text","value":"Lorne Zinman","user_id":0,"rest_url":false},{"type":"text","value":"Jeffrey D. Rothstein","user_id":0,"rest_url":false},{"type":"text","value":"MIchael Sendtner","user_id":0,"rest_url":false},{"type":"text","value":"Carsten Drepper","user_id":0,"rest_url":false},{"type":"text","value":"Evan E. Eichler","user_id":0,"rest_url":false},{"type":"text","value":"Can Alkan","user_id":0,"rest_url":false},{"type":"text","value":"Ziedulla Abdullaev","user_id":0,"rest_url":false},{"type":"text","value":"Svetlana D. Pack","user_id":0,"rest_url":false},{"type":"text","value":"Amalia Dutra","user_id":0,"rest_url":false},{"type":"text","value":"Evengenia Pak","user_id":0,"rest_url":false},{"type":"text","value":"John Hardy","user_id":0,"rest_url":false},{"type":"text","value":"Andrew SIngleton","user_id":0,"rest_url":false},{"type":"text","value":"Nigel M. Williams","user_id":0,"rest_url":false},{"type":"text","value":"Peter Heutink","user_id":0,"rest_url":false},{"type":"text","value":"Stuart Pickering-Brown","user_id":0,"rest_url":false},{"type":"text","value":"Huw R. Morris","user_id":0,"rest_url":false},{"type":"text","value":"Pentti J. Tienari","user_id":0,"rest_url":false},{"type":"text","value":"Bryan J. Traynor","user_id":0,"rest_url":false}],"msr_impact_theme":[],"msr_research_lab":[],"msr_event":[],"msr_group":[],"msr_project":[],"publication":[],"video":[],"msr-tool":[],"msr_publication_type":"article","related_content":[],"_links":{"self":[{"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-research-item\/322835","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-research-item"}],"about":[{"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/types\/msr-research-item"}],"version-history":[{"count":1,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-research-item\/322835\/revisions"}],"predecessor-version":[{"id":524995,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-research-item\/322835\/revisions\/524995"}],"wp:attachment":[{"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/media?parent=322835"}],"wp:term":[{"taxonomy":"msr-research-highlight","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-research-highlight?post=322835"},{"taxonomy":"msr-research-area","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/research-area?post=322835"},{"taxonomy":"msr-publication-type","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-publication-type?post=322835"},{"taxonomy":"msr-publisher","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-publisher?post=322835"},{"taxonomy":"msr-focus-area","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-focus-area?post=322835"},{"taxonomy":"msr-locale","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-locale?post=322835"},{"taxonomy":"msr-post-option","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-post-option?post=322835"},{"taxonomy":"msr-field-of-study","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-field-of-study?post=322835"},{"taxonomy":"msr-conference","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-conference?post=322835"},{"taxonomy":"msr-journal","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-journal?post=322835"},{"taxonomy":"msr-impact-theme","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-impact-theme?post=322835"},{"taxonomy":"msr-pillar","embeddable":true,"href":"https:\/\/www.microsoft.com\/en-us\/research\/wp-json\/wp\/v2\/msr-pillar?post=322835"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}