Publication Assessing the limits of zero-shot foundation models in single-cell biology Kasia Z. Kedzierska, Lorin Crawford, Ava P. Amini, Alex Lu bioRxiv | November 2023 Project
Publication TRIALSCOPE: A Unifying Causal Framework for Scaling Real-World Evidence Generation with Biomedical Language Models Javier González, Cliff Wong, Zelalem Gero, Jaspreet Bagga, Risa Ueno, Isabel Chien, Eduard Orakvin, Emre Kiciman, Aditya Nori, R. Weerasinghe, R. Leidner, B. Piening, Tristan Naumann, C. Bifulco, Hoifung Poon ArXiv | November 2023, Vol abs/2311.01301
Publication Exploring the Boundaries of GPT-4 in Radiology Qianchu Liu, Stephanie Hyland, Shruthi Bannur, Kenza Bouzid, Daniel Coelho de Castro, Maria Teodora Wetscherek, Robert Tinn, Harshita Sharma, Fernando Pérez-García, Anton Schwaighofer, Pranav Rajpurkar, Sameer Tajdin Khanna, Hoifung Poon, Naoto Usuyama, Anja Thieme, Aditya Nori, Matthew P Lungren, Ozan Oktay, Javier Alvarez-Valle EMNLP 2023 | October 2023 Project
Publication BiomedJourney: Counterfactual Biomedical Image Generation by Instruction-Learning from Multimodal Patient Journeys Yu Gu, Jianwei Yang, Naoto Usuyama, Chunyuan Li, Sheng Zhang, Matthew P Lungren, Jianfeng Gao, Hoifung Poon October 2023
Publication UniversalNER: Targeted Distillation from Large Language Models for Open Named Entity Recognition Wenxuan Zhou, Sheng Zhang, Yu Gu, Muhao Chen, Hoifung Poon ICLR 2024 | September 2023
Publication Scaling Clinical Trial Matching Using Large Language Models: A Case Study in Oncology Cliff Wong, Sheng Zhang, Yu Gu, Christine Moung, Jacob Abel, Naoto Usuyama, Roshanthi Weerasinghe, Brian Piening, Tristan Naumann, Carlo Bifulco, Hoifung Poon August 2023
Publication Distilling Large Language Models for Biomedical Knowledge Extraction: A Case Study on Adverse Drug Events Yu Gu, Sheng Zhang, Naoto Usuyama, Yonas Woldesenbet, Cliff Wong, Praneeth Sanapathi, Mu Wei, Naveen Valluri, Erika Strandberg, Tristan Naumann, Hoifung Poon July 2023
Publication What are the Desired Characteristics of Calibration Sets? Identifying Correlates on Long Form Scientific Summarization Griffin Adams, Bichlien Nguyen, Jake Smith, Yingce Xia, Shufang Xie, Anna Ostropolets, Budhaditya Deb, Yuan-Jyue Chen, Tristan Naumann, Noémie Elhadad ACL 2023 | July 2023
Publication Learning to Exploit Temporal Structure for Biomedical Vision-Language Processing Shruthi Bannur, Stephanie Hyland, Flora Liu, Fernando Pérez-García, Maximilian Ilse, Daniel Coelho de Castro, Benedikt Boecking, Harshita Sharma, Kenza Bouzid, Anja Thieme, Anton Schwaighofer, Maria Teodora Wetscherek, Matthew Lungren, Aditya Nori, Javier Alvarez-Valle, Ozan Oktay The IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) | June 2023 Access Project
Publication LLaVA-Med: Training a Large Language-and-Vision Assistant for Biomedicine in One Day Chunyuan Li, Cliff Wong, Sheng Zhang, Naoto Usuyama, Haotian Liu, Jianwei Yang, Tristan Naumann, Hoifung Poon, Jianfeng Gao June 2023 Video Project
